Python package

fix: make `submodule.update()` after `submodule.deinit()` work #2570

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Run time

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Job	Run time
test (ubuntu, 3.10)	3m 1s
test (ubuntu, 3.11)	2m 12s
test (ubuntu, 3.7)	2m 38s
test (macos, 3.8)	3m 15s
test (ubuntu, 3.8)	2m 16s
test (ubuntu, 3.12)	2m 53s
test (ubuntu, 3.13t)	7m 56s
test (ubuntu, 3.14)	1m 58s
test (macos, 3.10)	2m 50s
test (ubuntu, 3.9)	2m 50s
test (ubuntu, 3.13)	2m 30s
test (macos, 3.13)	2m 55s
test (windows, 3.10)	5m 41s
test (macos, 3.12)	2m 21s
test (windows, 3.7)	6m 41s
test (windows, 3.8)	6m 59s
test (ubuntu, 3.14t)	2m 6s
test (windows, 3.9)	7m 2s
test (macos, 3.14)	2m 44s
test (windows, 3.12)	5m 51s
test (windows, 3.11)	51m 1s
test (macos, 3.11)	2m 19s
test (macos, 3.9)	3m 15s
	2h 13m 14s